Protocol: Codex1d  Sequence: codex1d.c  Apptype: solidseq1d

Description: 

CODEX for the X channel with separate choices of SPINAL or TPPM
decoupling for acquisition and CODEX mixing.  

Parameter Groups: 

90H:  Module:  no
Sequence:  tancpx.c  
Description:  Provides a 90-degree pulse on dec that can be used 
              as a preparation pulse. Also used to store the dec 
              calibration.
Parameters:  Channels Page
       aH90  - the amplitude of the pulse.
       pwH90 - the pulse length.

cpHX:  Module:  yes
Sequence:  tancpx.c
Description:  Implements constant, linear or tangent-ramped cross 
              polarization from dec to obs. 
Parameters:  Sequence Page
       shHX - 'c', constant, 'l', linear and 't', tangent shape on
               the channel designated with chHX. 
       chHX - the variable-amplitude channel, 'fr' from or 'to', to. 
       aHhx - median amplitude of the dec channel.
       aXhx - median amplitude of the obs channel.
       bHX -  +/- tangent curvature (>0 to 1.0e5).  
       dHX -  amplitude width of the ramp. A negative width sets a
              ramp that starts high and decreases in amplitude.
       tHX -  contact time
       ofHX - overall offset on the variable channel
       frHX = 'dec' -  channel with the initial polarization (must 
              be set - not shown).           
       toHX = 'obs' -  channel with the final polarization (must be
              set - not shown). 
Implementation:  CP hx = getcp("HX",0.0,0.0,0,1); 
Underscore functions: _cp_(hx,phHhx,phXhx);  

cdxX: Module:  no
Sequence:  codex1d.c
Description:  Implements the CODEX recoupling sequence on the obs
              channel.
Parameters:  Sequence Page
       aXcdx - amplitude of obs pulses.
       pwXcdx - 360-degree flip on obs.
       nXcdx - CODEX rotor cycles.

echoX: Module:  no
Sequence:  ssecho1d.c
Description:  Implements a refocusing pulse with delays before and after
              the pulse.
Parameters:  Sequence Page
       aXecho - amplitude of the obs pulses.
       t1Xecho - delay before the refocusing pulse.
       pwXecho - 180-degree flip on obs.
       t2Xecho - delay after the refocusing pulse.

mixX:  Module:  no
Sequence:  tancp2drad.c
Description:  Implements a mixing delay in sequences where mixing or
              exchange occurs among the obs nuclei. Decoupling not 
              allowed during tXmix for this sequence.

Parameters:  Sequence Page
       tXmix - the mixing delay time. The delay may or may not be rotor
              synchronized, depending on the sequence.

The Parameter t1ZF is a Z-filter delay before CODEX, The parameter t2ZF
is a Z-filter delay after codex.  

A variable delay follows the t2ZF Z-filter. This delay has values
N*taur/4 where (N = 1,2,3 and 4) and (taur = 1/srate)on sucessive 
blocks of 4 scans.

Use the variable d2 to set the F1 evolution before CODEX mixing. 

Hmixseq:  Module: yes 
Sequence:  redor1tancp.c
Description:  Chooses SPINAL or TPPM decoupling on the dec channel
              during F1 and mixing periods when Hseq is used for
              acquisition.
Parameters:  Sequence Page - the Hmixspinal and Hmixtppm groups
              overlap.  Hmixseq chooses the decoupling sequence TPPM
              or SPINAL.
Implementation:  DSEQ mix = getdseq("H"); The router implements
              getspinal() or gettppm(), as selected.
Underscore functions:  _dseqon(mix); runs _tppm(); or _spinal();
             _dseqoff(mix); runs decprgoff(mix);

Hmixspinal:  Module: yes
Sequence:  redor1tancp.c
Description:  Implements SPINAL decoupling on the dec channel during
              typical F1 and mixing periods when Hspinal is used for
              acquisition.
Parameters:  Sequence Page
       aHmixspinal - amplitude of the dec channel.
       pwHmixspinal - approximate 180-degree flip.
       phHmixspinal - +/- small angle phase. SPINAL64 is implemented
              with phases = +/- 1.0, +/- 1.5 and +/-2.0 times
              phHmixspinal.
       chHmixspinal = 'dec' must be set (not shown).
Implementation: SPINAL mix = getspinal("H"); or DSEQ mix =
             getdseq("H");
Underscore functions: _spinal(mix); and decprgoff(); or _dseqon(mix);
             and _dseqoff(mix);
        
Hmixtppm:  Module: yes
Sequence:  redor1tancp.c
Description:  Implements TPPM decoupling on the dec channel during
              typical F1 and mixing periods when Htppm is used for
              acquisition.
Parameters:  Sequence Page
       aHmixtppm - amplitude of the dec channel.
       pwHmixtppm - approximate 180-degree flip angle on resonance.
       phHmixtppm - +/- small angle phase. TPPM is implemented
              with phases = +/- 1.0 times phHmixtppm for alternating
              pulses.
       chHmixtppm = 'dec' must be set (not shown).
Implementation: TPPM mix = gettppm("H"); or DSEQ mix = getdseq("H");
Underscore functions: _tppm(mix); and decprgoff(); or _dseqon(mix); and
              _dseqoff(mix);
 
Hseq:  Module:  yes 
Sequence:  tancpx.c      
Description: Chooses SPINAL or TPPM decoupling on the dec channel 
             during acquisition.
Parameters:  Sequence Page - the Hspinal and Htppm groups overlap.
       Hseq - chooses the decoupling sequence, TPPM or SPINAL. 
Implementation:  DSEQ dec = getdseq("H");  The router implements 
             getspinal() or gettppm(). 
Underscore functions: _dseqon(dec); runs _tppm(); or _spinal();_
             dseqoff(dec); runs decprgoff();  

Hspinal:  Module:  yes 
Sequence: tancpx.c  
Description:  Implements SPINAL decoupling on the dec channel during 
              acquisition.  
Parameters:  Sequence Page
       aHspinal - amplitude of the dec channel. 
       pwHspinal - approximate 180-degree flip angle on resonance. 
       phHspinal - +/- small angle phase. SPINAL64 is implemented 
              with phases = +/- 1.0, +/- 1.5 and +/-2.0 times 
              phHspinal. 
       chHspinal = 'dec' must be set (not shown).
Implementation: SPINAL dec = getspinal("H"); or DSEQ dec = 
              getdseq("H");  
Underscore functions: _spinal(dec); and decprgoff(); or 
             _dseqon(dec); and _dseqoff(dec);   

Htppm:  Module:  yes 
Sequence:  tancpx.c      
Description:  Implements TPPM decoupling on the dec channel during 
              acquisition.  
Parameters:  Sequence Page
       aHtppm - amplitude of the dec channel. 
       pwHtppm - approximate 180-degree flip angle on resonance. 
       phHtppm - +/- small angle phase. TPPM is implemented 
              with phases = +/- 1.0 times phHtppm for alternating 
              pulses.  
       chHtppm = 'dec' must be set (not shown).
Implementation: TPPM dec = gettppm("H"); or DSEQ dec = getdseq("H");   
Underscore functions: _tppmon(dec); and decprgoff(); or _dseqon(dec);
              and _dseqoff(dec);   
